BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C07LP1|AL427135
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1709 1752 0.0
>3x_Contig1709
Length = 16948
Score = 1752 bits (880), Expect = 0.0
Identities = 895/902 (99%), Gaps = 1/902 (0%)
Strand = Plus / Plus
Query: 1 acaccaaaacctagaaggaagaagcactactaccggaaaatgctaccgtttgtcatcgca 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3571 acaccaaaacctagaaggaagaagcact-ctaccggaaaatgctaccgtttgtcatcgca 3629
Query: 61 agaggtatactagaagtagaatggaattatgtcgcttctacatttcgtagatttttccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3630 agaggtatactagaagtagaatggaattatgtcgcttctacatttcgtagatttttccga 3689
Query: 121 atgaatatccattaattgactatcctatataactaataaactatggtttacacaacttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3690 atgaatatccattaattgactatcctatataactaataaactatggtttacacaacttca 3749
Query: 181 aaggcctagatcatttcaacacgaaatgatcacctcttagcttcaagtacgcttgttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3750 aaggcctagatcatttcaacacgaaatgatcacctcttagcttcaagtacgcttgttctg 3809
Query: 241 cgcccggtgccataggtttgattatcagcgaatatacctcgctgttgtggaaccttaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3810 cgcccggtgccataggtttgattatcagcgaatatacctcgctgttgtggaaccttaacc 3869
Query: 301 cggtattcggagctttatagtgagccttcaggcctgtcacatcacagtacttctttgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3870 cggtattcggagctttatagtgagccttcaggcctgtcacatcacagtacttctttgcag 3929
Query: 361 gtttagtagacggatatgcctgtwcgttaaagtatgataatctggttctattttggtctg 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3930 gtttagtagacggatatgcctgtacgttaaagtatgataatctggttctattttggtctg 3989
Query: 421 ggtcttcaggttctccatcctgtttttcctttgtatttgtwagacgtttccattcgtctg 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3990 ggtcttcaggttctccatcctgtttttcctttgtatttgtaagacgtttccattcgtctg 4049
Query: 481 ahatcaactgtctcgcattcttgttacgcttcagatgcttgtgccatgtcggttgtttga 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4050 aaatcaactgtctcgcattcttgttacgcttcagatgcttgtgccatgtcggttgtttga 4109
Query: 541 atcgtagtcctgttgtgtcgttctgagcagcaacatgcttcaagaattcaatcctatcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4110 atcgtagtcctgttgtgtcgttctgagcagcaacatgcttcaagaattcaatcctatcca 4169
Query: 601 ttccgtccatggcaagcgaatatwatttctatcacgtcaactcgcaactaaactattgta 660
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4170 ttccgtccatggcaagcgaatataatttctatcacgtcaactcgcaactaaactattgta 4229
Query: 661 ctaacgaacaattgcggtttcaacatcgatctttaactgatcttagttctgatgtctgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4230 ctaacgaacaattgcggtttcaacatcgatctttaactgatcttagttctgatgtctgtt 4289
Query: 721 ttaatctctgttctaatatgatagatattatcaagaaaagggtattccagtcttcaggtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4290 ttaatctctgttctaatatgatagatattatcaagaaaagggtattccagtcttcaggtc 4349
Query: 781 acgtgatttagaactaagcgagatagagaaaagcgacccacgtgactyacttcctgtccg 840
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4350 acgtgattcagaactaagcgagatagagaaaagcgacccacgtgactcacttcctgtccg 4409
Query: 841 ccgaatgcggcggcaattccgtttccgccccaccggtggacgggaagcgtgggctggctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4410 ccgaatgcggcggcaattccgtttccgccccaccggtggacgggaagcgtgggctggctg 4469
Query: 901 cc 902
||
Sbjct: 4470 cc 4471
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5114
Number of Sequences: 1807
Number of extensions: 5114
Number of successful extensions: 21
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)